AT5G22920


Description : CHY-type/CTCHY-type/RING-type Zinc finger protein


Gene families : OG_01_0001478 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001478_tree ,
OG_02_0001122 (LandPlants) Phylogenetic Tree(s): OG_02_0001122_tree ,
OG_03_0000963 (SeedPlants) Phylogenetic Tree(s): OG_03_0000963_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22920
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031467001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01033674001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.06 Archaeplastida
MA_10429565g0010 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.03 Archaeplastida
MA_126866g0010 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.06 Archaeplastida
Pp3c10_4820V3.1 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.02 Archaeplastida
Smo78412 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.03 Archaeplastida
Zm00001e004657_P008 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis... 0.03 Archaeplastida
GSVIVT01031467001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.05 LandPlants
GSVIVT01033674001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.06 LandPlants
MA_10429565g0010 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.03 LandPlants
MA_126866g0010 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.06 LandPlants
Pp3c10_4820V3.1 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.02 LandPlants
Smo78412 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.03 LandPlants
Zm00001e004657_P008 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis... 0.03 LandPlants
GSVIVT01031467001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.05 SeedPlants
GSVIVT01033674001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.04 SeedPlants
MA_10436725g0010 No alias E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis... 0.02 SeedPlants
MA_126866g0010 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.02 SeedPlants
Zm00001e004657_P008 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis... 0.03 SeedPlants
Zm00001e019943_P001 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008913 Znf_CHY 27 108
IPR001841 Znf_RING 162 205
IPR039512 RCHY1_zinc-ribbon 210 268
No external refs found!