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  5. Pir_g23690

Pir_g23690


Description : not classified & original description: none


Gene families : OG0000218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g23690
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00082380 USPL1, ATUSPL1,... BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00084450 ATRD22, RD22,... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00097920 ATRD22, RD22,... BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00087p00099700 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G70370 PG2 polygalacturonase 2 0.03 OrthoFinder output from all 47 species
AT5G25610 ATRD22, RD22 BURP domain-containing protein 0.03 OrthoFinder output from all 47 species
Aev_g08921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g19336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g19537 JP630, PG3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g27953 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g38151 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13543 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28122 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40032 USPL1, ATUSPL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06653 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36421 JP630, PG3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63303 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34468.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34471.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34476.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34479.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56826.t1 PG2, Aspi01Gene56826 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56875.t1 PG2, Aspi01Gene56875 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72190.t1 USPL1, ATUSPL1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72191.t1 USPL1, ATUSPL1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09864 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16986 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22938 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g26680 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40724 USPL1, ATUSPL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g10463 ATRD22, RD22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13160 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20107 PG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g31297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50946 USPL1, ATUSPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035702001 ATRD22, RD22 BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_01410 JP630, PG3 non-catalytic polygalacturonase regulator 0.04 OrthoFinder output from all 47 species
Gb_24161 PG2 BURP domain-containing protein 12 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Gb_34428 PG2 BURP domain-containing protein 12 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Gb_34429 PG2 BURP domain-containing protein 12 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Gb_39304 ATRD22, RD22 BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os05g12400.1 LOC_Os05g12400 BURP domain-containing protein 1 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os05g13490.1 LOC_Os05g13490 BURP domain-containing protein 8 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os06g13240.1 PG1, LOC_Os06g13240 BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os06g19800.1 LOC_Os06g19800 BURP domain-containing protein 11 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os08g29200.1 PG2, LOC_Os08g29200 non-catalytic polygalacturonase regulator 0.03 OrthoFinder output from all 47 species
Len_g09355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37163 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g51298 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20941 ATRD22, RD22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11951 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37668 JP630, PG3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37368 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g22049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g33800 USPL1, ATUSPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_21630V3.1 Pp3c4_21630 polygalacturonase 1 0.01 OrthoFinder output from all 47 species
Ppi_g00824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g062300.3.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Solyc02g062310.1.1 Solyc02g062310 BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Solyc02g062313.1.1 ATRD22, RD22,... BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Solyc02g062317.1.1 ATRD22, RD22,... BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Spa_g22747 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05891 PG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20244 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39166 JP630, PG3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003438_P003 ATRD22, RD22,... Protein RAFTIN 1A OS=Triticum aestivum... 0.04 OrthoFinder output from all 47 species
Zm00001e022326_P001 PG2, Zm00001e022326 non-catalytic polygalacturonase regulator 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR004873 BURP_dom 124 335
No external refs found!