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  5. Pir_g23329

Pir_g23329


Description : arabinogalactan protein *(Xylogen) & original description: none


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g23329
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT1G62790 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT2G44290 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
Als_g13708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10069449g0010 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Msp_g06696 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024328 No alias not classified & original description: CDS=429-857 0.02 OrthoFinder output from all 47 species
Smo411802 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e000506_P001 Zm00001e000506 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e033062_P001 Zm00001e033062 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 22 107
No external refs found!