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Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000215_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G27710 | No alias | 60S acidic ribosomal protein family | 0.08 | OrthoFinder output from all 47 species | |
| AT2G27720 | No alias | 60S acidic ribosomal protein family | 0.04 | OrthoFinder output from all 47 species | |
| AT3G44590 | No alias | 60S acidic ribosomal protein family | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g18224 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g00354 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g08057 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g06840 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g20777 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013340 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0076.g037804 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G042100.1 | Ceric.02G042100 | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020830.75 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Cre02.g143050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g03976 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g32367 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g45668 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g27939 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g29004 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36046 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g44019 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031366001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01033814001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01034757001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39007 | No alias | component RPP2 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g09510.4 | LOC_Os01g09510 | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g37330.1 | LOC_Os05g37330 | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g00319 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10431146g0010 | No alias | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| MA_177584g0010 | No alias | component RPP2 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
| MA_8598039g0010 | No alias | component RPP2 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
| Mp1g06260.1 | No alias | component RPP2 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Mp1g08160.1 | No alias | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g12854 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g25924 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g34262 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g40276 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g22542 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g35760 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c1_27060V3.1 | Pp3c1_27060 | 60S acidic ribosomal protein family | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g22305 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0038.g012004 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g17151 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g22627 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38961 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g40093 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g44452 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g45942 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g48423 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo139397 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g009447.1.1 | Solyc01g009447 | component RPP2 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g074430.4.1 | Solyc06g074430 | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g067100.2.1 | Solyc11g067100 | component RPP2 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g37475 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g40832 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g53019 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g12451 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g21399 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e006597_P001 | Zm00001e006597 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026591_P001 | Zm00001e026591 | component RPP2 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e026592_P001 | Zm00001e026592 | component RPP2 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e026593_P001 | Zm00001e026593 | component RPP2 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e041900_P001 | Zm00001e041900 | component RPP2 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000502 | proteasome complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009894 | regulation of catabolic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042176 | regulation of protein catabolic process | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |