1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g22905

Pir_g22905 (CSD1)


Aliases : CSD1

Description : copper/zinc superoxide dismutase *(CSD) & original description: none


Gene families : OG0000525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g22905
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Aob_g02663 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.02 OrthoFinder output from all 47 species
LOC_Os03g11960.1 CSD3, LOC_Os03g11960 copper/zinc superoxide dismutase 0.03 OrthoFinder output from all 47 species
Msp_g09965 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.03 OrthoFinder output from all 47 species
Ppi_g23973 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001424 SOD_Cu_Zn_dom 54 110
No external refs found!