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  5. AMTR_s00013p00233820

AMTR_s00013p00233820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.185

No description available


Gene families : OG_01_0006283 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006283_tree ,
OG_02_0008823 (LandPlants) Phylogenetic Tree(s): OG_02_0008823_tree ,
OG_03_0010038 (SeedPlants) Phylogenetic Tree(s): OG_03_0010038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00233820
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT3G27180 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 Archaeplastida
GSVIVT01033109001 No alias No description available 0.07 Archaeplastida
LOC_Os01g69120.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Pp3c10_19430V3.1 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.06 Archaeplastida
Solyc03g005010.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e028451_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
AT3G27180 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 LandPlants
GSVIVT01033109001 No alias No description available 0.07 LandPlants
LOC_Os01g69120.1 No alias no hits & (original description: none) 0.05 LandPlants
Pp3c10_19430V3.1 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.06 LandPlants
Zm00001e028451_P001 No alias no hits & (original description: none) 0.07 LandPlants
AT3G27180 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 SeedPlants
GSVIVT01033109001 No alias No description available 0.05 SeedPlants
LOC_Os01g69120.1 No alias no hits & (original description: none) 0.05 SeedPlants
Solyc03g005010.4.1 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e028451_P001 No alias no hits & (original description: none) 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
BP GO:0031167 rRNA methylation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004398 RNA_MeTrfase_RsmD 321 428
No external refs found!