1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g22411

Pir_g22411 (PRA1.E)


Aliases : PRA1.E

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g22411

Target Alias Description ECC score Gene Family Method Actions
AT1G55640 PRA1.G1 prenylated RAB acceptor 1.G1 0.03 OrthoFinder output from all 47 species
Aspi01Gene11341.t1 PRA1.B5, Aspi01Gene11341 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00455 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39132 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 37 177
No external refs found!