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AT5G20935


Description : unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0008786 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008786_tree ,
OG_02_0009218 (LandPlants) Phylogenetic Tree(s): OG_02_0009218_tree ,
OG_03_0011403 (SeedPlants) Phylogenetic Tree(s): OG_03_0011403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G20935
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00133000 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 Archaeplastida
GSVIVT01037512001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 Archaeplastida
Mp7g08120.1 No alias assembly factor CRR42 involved in NDH complex assembly 0.06 Archaeplastida
Solyc01g009245.1.1 No alias assembly factor CRR42 involved in NDH complex assembly 0.03 Archaeplastida
Zm00001e001503_P001 No alias assembly factor CRR42 involved in NDH complex assembly 0.04 Archaeplastida
AMTR_s00004p00133000 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 LandPlants
GSVIVT01037512001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 LandPlants
Mp7g08120.1 No alias assembly factor CRR42 involved in NDH complex assembly 0.06 LandPlants
Solyc01g009245.1.1 No alias assembly factor CRR42 involved in NDH complex assembly 0.03 LandPlants
Zm00001e001503_P001 No alias assembly factor CRR42 involved in NDH complex assembly 0.03 LandPlants
AMTR_s00004p00133000 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 SeedPlants
GSVIVT01037512001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 SeedPlants
Solyc01g009245.1.1 No alias assembly factor CRR42 involved in NDH complex assembly 0.03 SeedPlants
Zm00001e001503_P001 No alias assembly factor CRR42 involved in NDH complex assembly 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
BP GO:0016556 mRNA modification RCA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021495 DUF3148 35 97
No external refs found!