Smo404439 (PACid_15410206)


Aliases : PACid_15410206

Description : 30.3 signalling.calcium encodes a calmodulin-binding protein that is expressed specifically in pollen and is required for pollen development. no pollen germination 1 (NPG1) CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734) BEST Arabidopsis thaliana protein match is: no pollen germination related 2 (TAIR:AT4G28600.1) Has 573 Blast hits to 561 proteins in 155 species: Archae - 29 Bacteria - 89 Metazoa - 223 Fungi - 37 Plants - 141 Viruses - 0 Other Eukaryotes - 54 (source: NCBI BLink). (original description: no original description)'


Gene families : OG_01_0000851 (Gene family) Phylogenetic Tree(s): OG0000851_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo404439
Cluster HCCA cluster: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035547001 No alias 30.3 signalling.calcium encodes a calmodulin-binding... 0.01 Gene family
GSVIVT01035578001 No alias 30.3 signalling.calcium encodes a calmodulin-binding... 0.02 Gene family
Zm00001d032734 GRMZM2G117763 30.3 signalling.calcium encodes a calmodulin-binding... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!