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  5. Pir_g22186

Pir_g22186


Description : E3 ubiquitin ligase *(RIE1) & original description: none


Gene families : OG0001080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g22186

Target Alias Description ECC score Gene Family Method Actions
Pnu_g03422 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g067280.1.1 Solyc02g067280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 335 377
No external refs found!