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  5. Pir_g22176

Pir_g22176 (UBC25, PFU1)


Aliases : UBC25, PFU1

Description : not classified & original description: none


Gene families : OG0001231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g22176
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT2G33770 UBC24, PHO2, ATUBC24 phosphate 2 0.04 OrthoFinder output from all 47 species
LOC_Os01g13170.1 LOC_Os01g13170 Probable ubiquitin-conjugating enzyme E2 26... 0.03 OrthoFinder output from all 47 species
LOC_Os05g06120.1 PFU2, UBC23,... Probable ubiquitin-conjugating enzyme E2 23... 0.03 OrthoFinder output from all 47 species
Lfl_g28843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01476 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g078210.3.1 UBC24, PHO2,... ubiquitin-conjugating E2 protein (PHO2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 176 322
No external refs found!