AT5G20630 (ATGER3, GLP3B, GER3,...)


Aliases : ATGER3, GLP3B, GER3, GLP3A, GLP3

Description : germin 3


Gene families : OG_01_0000034 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000034_tree ,
OG_02_0004417 (LandPlants) Phylogenetic Tree(s): OG_02_0004417_tree ,
OG_03_0002746 (SeedPlants) Phylogenetic Tree(s): OG_03_0002746_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G20630
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00119070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00110p00020470 evm_27.TU.AmTr_v1... Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00114p00037920 evm_27.TU.AmTr_v1... Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G02335 GL22 germin-like protein subfamily 2 member 2 precursor 0.04 Archaeplastida
AT1G18980 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
AT1G74820 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT5G39160 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
GSVIVT01000062001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000063001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000065001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000067001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000068001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000069001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01013822001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01020142001 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01021700001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01021705001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01030965001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01030967001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01031082001 No alias Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_00713 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Gb_11136 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
Gb_25391 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_30305 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_34489 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g50900.1 No alias Germin-like protein 1-2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g52720.1 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os05g19670.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g35750.1 No alias Germin-like protein 8-13 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os08g35760.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10429090g0010 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.05 Archaeplastida
MA_42727g0010 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_43266g0010 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_7641850g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8404570g0010 No alias Germin-like protein subfamily 3 member 3 OS=Arabidopsis... 0.02 Archaeplastida
MA_9661534g0010 No alias Germin-like protein OS=Mesembryanthemum crystallinum... 0.02 Archaeplastida
Smo89841 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g088300.3.1 No alias Germin-like protein subfamily 1 member 15 OS=Arabidopsis... 0.05 Archaeplastida
Solyc03g123410.1.1 No alias Auxin-binding protein ABP19a OS=Prunus persica... 0.03 Archaeplastida
Solyc07g041720.1.1 No alias Auxin-binding protein ABP19a OS=Prunus persica... 0.03 Archaeplastida
Zm00001e021636_P002 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e021637_P001 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e031079_P001 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e032937_P001 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_8404570g0010 No alias Germin-like protein subfamily 3 member 3 OS=Arabidopsis... 0.02 LandPlants
Solyc03g123410.1.1 No alias Auxin-binding protein ABP19a OS=Prunus persica... 0.03 LandPlants
Solyc07g041720.1.1 No alias Auxin-binding protein ABP19a OS=Prunus persica... 0.03 LandPlants
Zm00001e031079_P001 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.06 LandPlants
AMTR_s00024p00231430 evm_27.TU.AmTr_v1... Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana 0.02 SeedPlants
MA_8404570g0010 No alias Germin-like protein subfamily 3 member 3 OS=Arabidopsis... 0.01 SeedPlants
Solyc07g041720.1.1 No alias Auxin-binding protein ABP19a OS=Prunus persica... 0.03 SeedPlants
Zm00001e031079_P001 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005634 nucleus IDA Interproscan
BP GO:0009409 response to cold IEP Interproscan
BP GO:0009409 response to cold RCA Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
BP GO:0009735 response to cytokinin IDA Interproscan
BP GO:0010103 stomatal complex morphogenesis RCA Interproscan
BP GO:0018119 peptidyl-cysteine S-nitrosylation IDA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
BP GO:0030003 cellular cation homeostasis RCA Interproscan
CC GO:0031012 extracellular matrix IDA Interproscan
BP GO:0042742 defense response to bacterium RCA Interproscan
CC GO:0048046 apoplast IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006045 Cupin_1 57 200
No external refs found!