AT5G20630 (ATGER3, GLP3B, GER3,...)

Aliases : ATGER3, GLP3B, GER3, GLP3A, GLP3

Description : germin 3

Gene families : OG_01_0000034 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000034_tree ,
OG_02_0004417 (LandPlants) Phylogenetic Tree(s): OG_02_0004417_tree ,
OG_03_0002746 (SeedPlants) Phylogenetic Tree(s): OG_03_0002746_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G20630
Cluster	HCCA: Cluster_183

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00089p00119070	evm_27.TU.AmTr_v1...	Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
AMTR_s00110p00020470	evm_27.TU.AmTr_v1...	Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00114p00037920	evm_27.TU.AmTr_v1...	Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana	0.03	Archaeplastida
AT1G02335	GL22	germin-like protein subfamily 2 member 2 precursor	0.04	Archaeplastida
AT1G18980	No alias	RmlC-like cupins superfamily protein	0.02	Archaeplastida
AT1G74820	No alias	RmlC-like cupins superfamily protein	0.04	Archaeplastida
AT5G39160	No alias	RmlC-like cupins superfamily protein	0.04	Archaeplastida
GSVIVT01000062001	No alias	Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01000063001	No alias	Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01000065001	No alias	Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01000067001	No alias	Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01000068001	No alias	Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01000069001	No alias	Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01013822001	No alias	Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
GSVIVT01020142001	No alias	Germin-like protein 3-1 OS=Oryza sativa subsp. japonica	0.05	Archaeplastida
GSVIVT01021700001	No alias	Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
GSVIVT01021705001	No alias	Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
GSVIVT01030965001	No alias	Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
GSVIVT01030967001	No alias	Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
GSVIVT01031082001	No alias	Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana	0.02	Archaeplastida
Gb_00713	No alias	Germin-like protein subfamily 3 member 2 OS=Arabidopsis...	0.03	Archaeplastida
Gb_11136	No alias	Germin-like protein 1-1 OS=Oryza sativa subsp. japonica...	0.07	Archaeplastida
Gb_25391	No alias	Germin-like protein subfamily 1 member 1 OS=Arabidopsis...	0.04	Archaeplastida
Gb_30305	No alias	Germin-like protein subfamily 2 member 1 OS=Arabidopsis...	0.03	Archaeplastida
Gb_34489	No alias	Germin-like protein subfamily 2 member 1 OS=Arabidopsis...	0.03	Archaeplastida
LOC_Os01g50900.1	No alias	Germin-like protein 1-2 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os04g52720.1	No alias	Germin-like protein 4-1 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os05g19670.1	No alias	Germin-like protein 5-1 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os08g35750.1	No alias	Germin-like protein 8-13 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os08g35760.1	No alias	Germin-like protein 8-14 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_10429090g0010	No alias	Germin-like protein subfamily 1 member 1 OS=Arabidopsis...	0.05	Archaeplastida
MA_42727g0010	No alias	Germin-like protein 3-1 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_43266g0010	No alias	Germin-like protein 8-4 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_7641850g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_8404570g0010	No alias	Germin-like protein subfamily 3 member 3 OS=Arabidopsis...	0.02	Archaeplastida
MA_9661534g0010	No alias	Germin-like protein OS=Mesembryanthemum crystallinum...	0.02	Archaeplastida
Smo89841	No alias	Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana	0.03	Archaeplastida
Solyc01g088300.3.1	No alias	Germin-like protein subfamily 1 member 15 OS=Arabidopsis...	0.05	Archaeplastida
Solyc03g123410.1.1	No alias	Auxin-binding protein ABP19a OS=Prunus persica...	0.03	Archaeplastida
Solyc07g041720.1.1	No alias	Auxin-binding protein ABP19a OS=Prunus persica...	0.03	Archaeplastida
Zm00001e021636_P002	No alias	Germin-like protein 12-2 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e021637_P001	No alias	Germin-like protein 12-2 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e031079_P001	No alias	Germin-like protein 8-14 OS=Oryza sativa subsp. japonica...	0.06	Archaeplastida
Zm00001e032937_P001	No alias	Germin-like protein 5-1 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
MA_8404570g0010	No alias	Germin-like protein subfamily 3 member 3 OS=Arabidopsis...	0.02	LandPlants
Solyc03g123410.1.1	No alias	Auxin-binding protein ABP19a OS=Prunus persica...	0.03	LandPlants
Solyc07g041720.1.1	No alias	Auxin-binding protein ABP19a OS=Prunus persica...	0.03	LandPlants
Zm00001e031079_P001	No alias	Germin-like protein 8-14 OS=Oryza sativa subsp. japonica...	0.06	LandPlants
AMTR_s00024p00231430	evm_27.TU.AmTr_v1...	Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana	0.02	SeedPlants
MA_8404570g0010	No alias	Germin-like protein subfamily 3 member 3 OS=Arabidopsis...	0.01	SeedPlants
Solyc07g041720.1.1	No alias	Auxin-binding protein ABP19a OS=Prunus persica...	0.03	SeedPlants
Zm00001e031079_P001	No alias	Germin-like protein 8-14 OS=Oryza sativa subsp. japonica...	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009409	response to cold	RCA	Interproscan
CC	GO:0009505	plant-type cell wall	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010103	stomatal complex morphogenesis	RCA	Interproscan
BP	GO:0017014	protein nitrosylation	None	Extended
BP	GO:0018119	peptidyl-cysteine S-nitrosylation	IDA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018198	peptidyl-cysteine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019684	photosynthesis, light reaction	RCA	Interproscan
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0030003	cellular cation homeostasis	RCA	Interproscan
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031012	extracellular matrix	IDA	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0042742	defense response to bacterium	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090626	plant epidermis morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006045	Cupin_1	57	200

External Links

No external refs found!

AT5G20630 (ATGER3, GLP3B, GER3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation