Pir_g21640 (MBD4)

Aliases : MBD4

Description : methylation reader *(MBD1-4/12) & original description: none

Gene families : OG0001754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001754_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g21640

Target	Alias	Description	ECC score	Gene Family Method
AT4G22745	MBD1	methyl-CPG-binding domain 1	0.02	OrthoFinder output from all 47 species
AT5G35338	MBD12	No description available	0.03	OrthoFinder output from all 47 species
Nbi_g04694	MBD02, ATMBD2, MBD2	methylation reader *(MBD1-4/12) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g05353	MBD02, ATMBD2, MBD2	methylation reader *(MBD1-4/12) & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	87	147
IPR011124	Znf_CW	26	73

External Links

No external refs found!