AT5G20240 (PI)


Aliases : PI

Description : K-box region and MADS-box transcription factor family protein


Gene families : OG_01_0000011 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000011_tree ,
OG_02_0000008 (LandPlants) Phylogenetic Tree(s): OG_02_0000008_tree ,
OG_03_0000013 (SeedPlants) Phylogenetic Tree(s): OG_03_0000013_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G20240
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00217560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
AMTR_s00001p00218870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00001p00267050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
AMTR_s00017p00244900 evm_27.TU.AmTr_v1... Floral homeotic protein PMADS 2 OS=Petunia hybrida 0.06 Archaeplastida
AMTR_s00021p00254030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.05 Archaeplastida
AMTR_s00047p00190220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
AMTR_s00071p00193200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
AMTR_s00089p00081270 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00140p00045380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AT1G71692 XAL1, AGL12 AGAMOUS-like 12 0.03 Archaeplastida
AT2G22630 AGL17 AGAMOUS-like 17 0.04 Archaeplastida
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.05 Archaeplastida
AT3G30260 AGL79 AGAMOUS-like 79 0.04 Archaeplastida
AT3G58780 AGL1, SHP1 K-box region and MADS-box transcription factor family protein 0.04 Archaeplastida
AT4G09960 STK, AGL11 K-box region and MADS-box transcription factor family protein 0.05 Archaeplastida
AT4G11880 AGL14 AGAMOUS-like 14 0.06 Archaeplastida
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.07 Archaeplastida
GSVIVT01008139001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.06 Archaeplastida
GSVIVT01008560001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01008806001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.06 Archaeplastida
GSVIVT01009815001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.05 Archaeplastida
GSVIVT01012250001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01018450001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01019883001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.05 Archaeplastida
GSVIVT01021534001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.05 Archaeplastida
GSVIVT01022182001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01033253001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01035477001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01038474001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
Gb_03068 No alias transcription factor (MADS/AGL) 0.06 Archaeplastida
Gb_16301 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_28337 No alias MADS-box transcription factor 6 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Gb_41550 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os01g66030.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os02g07430.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os02g45770.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os06g23980.1 No alias MADS-box transcription factor 27 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os12g10540.3 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_10434339g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.03 Archaeplastida
MA_13933g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_16629g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_175522g0010 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
MA_19387g0010 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
MA_20467g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_20467g0020 No alias MADS-box transcription factor 6 OS=Oryza sativa subsp.... 0.05 Archaeplastida
MA_211156g0010 No alias no description available(sp|q93xh4|mads1_vitvi : 152.0) 0.02 Archaeplastida
MA_25342g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_276701g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_333471g0010 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
MA_502016g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.02 Archaeplastida
MA_6279308g0010 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
MA_629987g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.03 Archaeplastida
MA_63212g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6544g0010 No alias Floral homeotic protein AGAMOUS OS=Panax ginseng... 0.02 Archaeplastida
MA_78010g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_8748850g0010 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
MA_899014g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_9382435g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_9841429g0010 No alias transcription factor (MADS/AGL) 0.06 Archaeplastida
Pp3c16_19170V3.1 No alias AGAMOUS-like 61 0.03 Archaeplastida
Pp3c25_6940V3.1 No alias AGAMOUS-like 62 0.05 Archaeplastida
Smo121275 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.06 Archaeplastida
Solyc01g080785.1.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc01g093960.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc01g106710.1.1 No alias component MED19 of head module of MEDIATOR transcription... 0.06 Archaeplastida
Solyc02g065730.2.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc02g071730.4.1 No alias transcription factor (MADS/AGL) 0.06 Archaeplastida
Solyc02g089210.4.1 No alias transcription factor (MADS/AGL) 0.07 Archaeplastida
Solyc04g005320.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc04g081000.3.1 No alias transcription factor (MADS/AGL) 0.07 Archaeplastida
Solyc05g012020.4.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Solyc05g051825.1.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc06g059970.4.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc06g069430.3.1 No alias transcription factor (MADS/AGL) 0.07 Archaeplastida
Solyc08g067230.4.1 No alias No annotation 0.06 Archaeplastida
Solyc10g080030.2.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Solyc11g005120.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g032100.2.1 No alias transcription factor (MADS/AGL) 0.08 Archaeplastida
Solyc12g056460.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e003667_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e010125_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e013738_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e016529_P004 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e019057_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e026007_P004 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027031_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e027034_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e030187_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e030373_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e031267_P003 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e034629_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e038096_P002 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e039774_P001 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
AMTR_s00001p00218870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
AMTR_s00001p00267050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
AMTR_s00017p00244900 evm_27.TU.AmTr_v1... Floral homeotic protein PMADS 2 OS=Petunia hybrida 0.04 LandPlants
AMTR_s00021p00254030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.05 LandPlants
AMTR_s00047p00190220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.05 LandPlants
AMTR_s00071p00193200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
AMTR_s00089p00081270 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.04 LandPlants
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
AT1G77950 AGL67 AGAMOUS-like 67 0.03 LandPlants
AT2G22630 AGL17 AGAMOUS-like 17 0.04 LandPlants
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.04 LandPlants
AT3G30260 AGL79 AGAMOUS-like 79 0.04 LandPlants
AT4G09960 STK, AGL11 K-box region and MADS-box transcription factor family protein 0.05 LandPlants
AT4G11880 AGL14 AGAMOUS-like 14 0.06 LandPlants
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.04 LandPlants
GSVIVT01002442001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01008139001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.06 LandPlants
GSVIVT01008560001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01008806001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.06 LandPlants
GSVIVT01010521001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01012250001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 LandPlants
GSVIVT01018450001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 LandPlants
GSVIVT01019883001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01021534001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.06 LandPlants
GSVIVT01022182001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01027577001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01033253001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01035477001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
Gb_03068 No alias transcription factor (MADS/AGL) 0.05 LandPlants
Gb_16301 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Gb_28587 No alias transcription factor (MADS/AGL) 0.02 LandPlants
LOC_Os01g10504.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
LOC_Os02g07430.1 No alias transcription factor (MADS/AGL) 0.03 LandPlants
LOC_Os02g45770.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
LOC_Os03g54160.1 No alias transcription factor (MADS/AGL) 0.01 LandPlants
LOC_Os05g11380.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
LOC_Os06g23950.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
LOC_Os12g10540.3 No alias transcription factor (MADS/AGL) 0.03 LandPlants
MA_10434339g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.03 LandPlants
MA_13933g0010 No alias transcription factor (MADS/AGL) 0.02 LandPlants
MA_175522g0010 No alias transcription factor (MADS/AGL) 0.02 LandPlants
MA_18048g0010 No alias transcription factor (MADS/AGL) 0.02 LandPlants
MA_19387g0010 No alias transcription factor (MADS/AGL) 0.04 LandPlants
MA_20467g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_20467g0020 No alias MADS-box transcription factor 6 OS=Oryza sativa subsp.... 0.03 LandPlants
MA_211156g0010 No alias no description available(sp|q93xh4|mads1_vitvi : 152.0) 0.02 LandPlants
MA_32676g0010 No alias transcription factor (MADS/AGL) 0.02 LandPlants
MA_333471g0010 No alias transcription factor (MADS/AGL) 0.04 LandPlants
MA_502016g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.02 LandPlants
MA_6279308g0010 No alias transcription factor (MADS/AGL) 0.03 LandPlants
MA_629987g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.03 LandPlants
MA_63212g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_8748850g0010 No alias transcription factor (MADS/AGL) 0.04 LandPlants
MA_9382435g0010 No alias no hits & (original description: none) 0.05 LandPlants
MA_951956g0010 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Pp3c16_19170V3.1 No alias AGAMOUS-like 61 0.01 LandPlants
Pp3c25_6940V3.1 No alias AGAMOUS-like 62 0.03 LandPlants
Smo121275 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
Solyc01g080785.1.1 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Solyc01g093960.3.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc01g106710.1.1 No alias component MED19 of head module of MEDIATOR transcription... 0.05 LandPlants
Solyc02g065730.2.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc02g071730.4.1 No alias transcription factor (MADS/AGL) 0.06 LandPlants
Solyc02g089210.4.1 No alias transcription factor (MADS/AGL) 0.07 LandPlants
Solyc04g005320.3.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc04g078300.3.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc05g012020.4.1 No alias transcription factor (MADS/AGL) 0.04 LandPlants
Solyc06g059970.4.1 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Solyc06g069430.3.1 No alias transcription factor (MADS/AGL) 0.06 LandPlants
Solyc08g067230.4.1 No alias No annotation 0.05 LandPlants
Solyc10g080030.2.1 No alias transcription factor (MADS/AGL) 0.05 LandPlants
Solyc11g005120.3.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc12g056460.3.1 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Zm00001e003667_P001 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Zm00001e006950_P001 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Zm00001e010125_P001 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Zm00001e013738_P001 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Zm00001e016529_P004 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Zm00001e019029_P001 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Zm00001e019057_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e026007_P004 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e027031_P001 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Zm00001e027034_P001 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Zm00001e031267_P003 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Zm00001e032487_P001 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Zm00001e034629_P001 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Zm00001e038096_P002 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Zm00001e039774_P001 No alias transcription factor (MADS/AGL) 0.05 LandPlants
AMTR_s00001p00218870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 SeedPlants
AMTR_s00017p00244900 evm_27.TU.AmTr_v1... Floral homeotic protein PMADS 2 OS=Petunia hybrida 0.03 SeedPlants
AMTR_s00089p00081270 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 SeedPlants
AT4G11880 AGL14 AGAMOUS-like 14 0.04 SeedPlants
GSVIVT01006592001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 SeedPlants
GSVIVT01008806001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.06 SeedPlants
GSVIVT01021534001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 SeedPlants
Gb_03068 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
Gb_41550 No alias transcription factor (MADS/AGL) 0.01 SeedPlants
LOC_Os02g07430.1 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
MA_10434339g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.02 SeedPlants
MA_13933g0010 No alias transcription factor (MADS/AGL) 0.01 SeedPlants
MA_19387g0010 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
MA_32676g0010 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
MA_333471g0010 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
MA_502016g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.02 SeedPlants
MA_629987g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.02 SeedPlants
MA_9382435g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc01g106710.1.1 No alias component MED19 of head module of MEDIATOR transcription... 0.04 SeedPlants
Solyc06g059970.4.1 No alias transcription factor (MADS/AGL) 0.03 SeedPlants
Solyc08g067230.4.1 No alias No annotation 0.04 SeedPlants
Solyc10g080030.2.1 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
Zm00001e006950_P001 No alias transcription factor (MADS/AGL) 0.03 SeedPlants
Zm00001e013738_P001 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
Zm00001e019057_P001 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e027031_P001 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
Zm00001e027034_P001 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
Zm00001e038096_P002 No alias transcription factor (MADS/AGL) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0048481 plant ovule development RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002487 TF_Kbox 82 164
IPR002100 TF_MADSbox 10 57
No external refs found!