AMTR_s00001p00272070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.504

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG_01_0000509 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000509_tree ,
OG_02_0000283 (LandPlants) Phylogenetic Tree(s): OG_02_0000283_tree ,
OG_03_0000646 (SeedPlants) Phylogenetic Tree(s): OG_03_0000646_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00272070
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AT2G46810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G65320 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01028719001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
LOC_Os02g46560.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os03g03000.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os03g08930.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os04g50090.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os08g37730.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os09g29360.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os10g23050.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_120602g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_57244g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c22_14220V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo91359 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc01g080050.4.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc04g074810.4.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc11g010340.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e009989_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e014279_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e015494_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e024824_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e026643_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e037075_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e041403_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
AT2G46810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
AT5G65320 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
GSVIVT01028719001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
Gb_17233 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os02g15760.1 No alias transcription factor (bHLH) 0.01 LandPlants
LOC_Os02g46560.1 No alias transcription factor (bHLH) 0.04 LandPlants
LOC_Os03g08930.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os04g50090.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os08g37730.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os09g29360.1 No alias transcription factor (bHLH) 0.03 LandPlants
MA_120602g0010 No alias transcription factor (bHLH) 0.03 LandPlants
MA_57244g0010 No alias transcription factor (bHLH) 0.02 LandPlants
Pp3c22_14220V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 LandPlants
Smo91359 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
Solyc04g074810.4.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc11g010340.2.1 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e009989_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e014279_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e015494_P002 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e024824_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e037075_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e041403_P001 No alias transcription factor (bHLH) 0.04 LandPlants
LOC_Os02g46560.1 No alias transcription factor (bHLH) 0.03 SeedPlants
LOC_Os03g08930.1 No alias transcription factor (bHLH) 0.03 SeedPlants
LOC_Os04g50090.1 No alias transcription factor (bHLH) 0.03 SeedPlants
LOC_Os08g37730.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os09g29360.1 No alias transcription factor (bHLH) 0.02 SeedPlants
Zm00001e009989_P001 No alias transcription factor (bHLH) 0.02 SeedPlants
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 187 238
No external refs found!