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  5. Pir_g21304

Pir_g21304 (HTA7)


Aliases : HTA7

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g21304
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
AT1G51060 HTA10 histone H2A 10 0.02 OrthoFinder output from all 47 species
AT3G20670 HTA13 histone H2A 13 0.02 OrthoFinder output from all 47 species
AT4G27230 HTA2 histone H2A 2 0.03 OrthoFinder output from all 47 species
AT5G59870 HTA6 histone H2A 6 0.01 OrthoFinder output from all 47 species
Ala_g34046 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11673 GAMMA-H2AX,... histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g01994 HTA7 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g05714 HTA10 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09992 GAMMA-H2AX,... histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g09993 GAMMA-H2AX,... histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05349.t1 HTA6, Aspi01Gene05349 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene19828.t1 GAMMA-H2AX,... histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene48036.t1 HTA7, Aspi01Gene48036 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene48040.t1 HTA7, Aspi01Gene48040 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G035000.1 HTA7, Ceric.25G035000 histone *(H2A) & original description: pacid=50593123... 0.01 OrthoFinder output from all 47 species
Ceric.25G059300.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50594046... 0.01 OrthoFinder output from all 47 species
Ceric.37G036600.1 HTA7, Ceric.37G036600 histone *(H2A) & original description: pacid=50616072... 0.02 OrthoFinder output from all 47 species
Cre17.g714100 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Dac_g06100 HTA6 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g13937 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12274 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19076 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37716 GAMMA-H2AX,... histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g39892 HTA10 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
MA_11514g0010 HTA10 histone (H2A) 0.01 OrthoFinder output from all 47 species
Mp3g02370.1 HTA13 histone (H2A) 0.01 OrthoFinder output from all 47 species
Msp_g29485 GAMMA-H2AX,... histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g09403 HTA7 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39648 GAMMA-H2AX,... histone *(H2A) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g05117 HTA6 histone *(H2A) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g58974 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62733 HTA7 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000823 GAMMA-H2AX,... histone *(H2A) & original description: CDS=1-471 0.09 OrthoFinder output from all 47 species
Sam_g10764 No alias histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10765 No alias histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g010400.3.1 HTA12, Solyc09g010400 histone (H2A) 0.03 OrthoFinder output from all 47 species
Solyc11g073250.2.1 HTA12, Solyc11g073250 histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e011643_P001 HTA6, Zm00001e011643 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e020483_P001 HTA6, Zm00001e020483 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e033014_P001 HTA6, Zm00001e033014 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e034815_P001 HTA12, Zm00001e034815 histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e039735_P001 GAMMA-H2AX,... histone (H2A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 16 92
IPR032454 Histone_H2A_C 95 128
No external refs found!