AT5G19820 (emb2734)


Aliases : emb2734

Description : ARM repeat superfamily protein


Gene families : OG_01_0002395 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002395_tree ,
OG_02_0002788 (LandPlants) Phylogenetic Tree(s): OG_02_0002788_tree ,
OG_03_0002611 (SeedPlants) Phylogenetic Tree(s): OG_03_0002611_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G19820
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00103300 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
Cpa|evm.model.tig00001030.13 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
Cre14.g633750 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 Archaeplastida
GSVIVT01025460001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 Archaeplastida
GSVIVT01033417001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.07 Archaeplastida
LOC_Os03g49420.1 No alias IMB3 nucleocytoplasmic import karyopherin 0.06 Archaeplastida
MA_10432206g0010 No alias IMB3 nucleocytoplasmic import karyopherin 0.03 Archaeplastida
Mp3g07820.1 No alias IMB3 nucleocytoplasmic import karyopherin 0.09 Archaeplastida
Pp3c11_22120V3.1 No alias ARM repeat superfamily protein 0.05 Archaeplastida
Pp3c7_4470V3.1 No alias ARM repeat superfamily protein 0.03 Archaeplastida
Smo140234 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
Solyc01g044360.4.1 No alias No annotation 0.1 Archaeplastida
Zm00001e005369_P004 No alias IMB3 nucleocytoplasmic import karyopherin 0.09 Archaeplastida
Zm00001e035335_P001 No alias IMB3 nucleocytoplasmic import karyopherin 0.12 Archaeplastida
AMTR_s00068p00103300 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 LandPlants
GSVIVT01025460001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 LandPlants
GSVIVT01033417001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.07 LandPlants
LOC_Os03g49420.1 No alias IMB3 nucleocytoplasmic import karyopherin 0.06 LandPlants
MA_10432206g0010 No alias IMB3 nucleocytoplasmic import karyopherin 0.03 LandPlants
Mp3g07820.1 No alias IMB3 nucleocytoplasmic import karyopherin 0.09 LandPlants
Pp3c11_22120V3.1 No alias ARM repeat superfamily protein 0.05 LandPlants
Pp3c7_4470V3.1 No alias ARM repeat superfamily protein 0.03 LandPlants
Smo140234 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 LandPlants
Solyc01g044360.4.1 No alias No annotation 0.1 LandPlants
Zm00001e005369_P004 No alias IMB3 nucleocytoplasmic import karyopherin 0.09 LandPlants
Zm00001e035335_P001 No alias IMB3 nucleocytoplasmic import karyopherin 0.12 LandPlants
AMTR_s00068p00103300 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 SeedPlants
GSVIVT01025460001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 SeedPlants
GSVIVT01033417001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.07 SeedPlants
LOC_Os03g49420.1 No alias IMB3 nucleocytoplasmic import karyopherin 0.06 SeedPlants
Solyc01g044360.4.1 No alias No annotation 0.1 SeedPlants
Zm00001e005369_P004 No alias IMB3 nucleocytoplasmic import karyopherin 0.09 SeedPlants
Zm00001e035335_P001 No alias IMB3 nucleocytoplasmic import karyopherin 0.12 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0009165 nucleotide biosynthetic process RCA Interproscan
BP GO:0009793 embryo development ending in seed dormancy NAS Interproscan
MF GO:0016829 lyase activity ISS Interproscan
CC GO:0030089 phycobilisome ISS Interproscan
BP GO:0052541 plant-type cell wall cellulose metabolic process RCA Interproscan
BP GO:0052546 cell wall pectin metabolic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000357 HEAT 926 953
No external refs found!