AT5G19080


Description : RING/U-box superfamily protein


Gene families : OG_01_0001224 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001224_tree ,
OG_02_0001305 (LandPlants) Phylogenetic Tree(s): OG_02_0001305_tree ,
OG_03_0001650 (SeedPlants) Phylogenetic Tree(s): OG_03_0001650_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G19080
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00085190 evm_27.TU.AmTr_v1... Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cpa|evm.model.tig00000144.129 No alias No description available 0.02 Archaeplastida
Cre03.g173900 No alias Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre09.g399439 No alias No description available 0.02 Archaeplastida
GSVIVT01025175001 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os03g15000.1 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os05g33000.2 No alias Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os10g13670.1 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.01 Archaeplastida
Solyc01g098750.3.1 No alias Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis... 0.04 Archaeplastida
AMTR_s00025p00085190 evm_27.TU.AmTr_v1... Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01025175001 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana 0.03 LandPlants
Gb_39665 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.02 LandPlants
LOC_Os05g33000.2 No alias Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis... 0.04 LandPlants
LOC_Os10g13670.1 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.01 LandPlants
Smo98973 No alias Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana 0.01 LandPlants
Solyc01g098750.3.1 No alias Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis... 0.03 LandPlants
GSVIVT01000020001 No alias Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana 0.02 SeedPlants
GSVIVT01025175001 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana 0.03 SeedPlants
Gb_39665 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.01 SeedPlants
LOC_Os05g33000.2 No alias Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis... 0.03 SeedPlants
LOC_Os10g13670.1 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.01 SeedPlants
Solyc01g098750.3.1 No alias Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!