1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g20233

Pir_g20233


Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g20233

Target Alias Description ECC score Gene Family Method Actions
Lfl_g03420 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g03150.1 CAMTA3, SR1 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005559 CG-1_dom 25 138
IPR000048 IQ_motif_EF-hand-BS 955 974
IPR000048 IQ_motif_EF-hand-BS 857 875
IPR000048 IQ_motif_EF-hand-BS 880 899
IPR002110 Ankyrin_rpt 649 739
No external refs found!