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  5. Pir_g20165

Pir_g20165


Description : not classified & original description: none


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g20165
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00036450 evm_27.TU.AmTr_v1... Patellin-4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G22530 PATL2 PATELLIN 2 0.04 OrthoFinder output from all 47 species
Als_g27095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G077900.1 Ceric.03G077900 not classified & original description: pacid=50572716... 0.03 OrthoFinder output from all 47 species
Ceric.37G040600.1 Ceric.37G040600 not classified & original description: pacid=50615839... 0.03 OrthoFinder output from all 47 species
Dcu_g08932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036782001 No alias Patellin-4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os05g27820.1 LOC_Os05g27820 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g10570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo90159 No alias Patellin-6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Zm00001e028652_P001 Zm00001e028652 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011074 CRAL/TRIO_N_dom 352 389
IPR001251 CRAL-TRIO_dom 414 571
No external refs found!