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  5. Pir_g20079

Pir_g20079


Description : E3 ubiquitin ligase *(SR1) & original description: none


Gene families : OG0001832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g20079

Target Alias Description ECC score Gene Family Method Actions
Aob_g05330 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.80 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Ehy_g09564 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g14840.1 LOC_Os01g14840 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g05648 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.04 OrthoFinder output from all 47 species
MA_137330g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g10416 No alias E3 ubiquiTin ligase *(SR1) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000695_P002 Zm00001e000695 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA

No InterPro domains available for this sequence

No external refs found!