Aliases : SVR1
Description : plastidial rRNA pseudouridine synthase *(SVR1) & original description: none
Gene families : OG0003742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003742_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G39140 | SVR1 | pseudouridine synthase family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g021649 | SVR1 | plastidial rRNA pseudouridine synthase *(SVR1) &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g08940 | SVR1 | plastidial rRNA pseudouridine synthase *(SVR1) &... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g12885 | SVR1 | plastidial rRNA pseudouridine synthase *(SVR1) &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.20G017700.1 | SVR1, Ceric.20G017700 | plastidial rRNA pseudouridine synthase *(SVR1) &... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g02338 | SVR1 | plastidial rRNA pseudouridine synthase *(SVR1) &... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g05806.1 | SVR1, LOC_Os03g05806 | rRNA pseudouridine synthase (RsuA) | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0123.g021502 | SVR1 | plastidial rRNA pseudouridine synthase *(SVR1) &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g49457 | No alias | plastidial rRNA pseudouridine synthase *(SVR1) &... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g22396 | SVR1 | plastidial rRNA pseudouridine synthase *(SVR1) &... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e000423_P001 | SVR1, Zm00001e000423 | rRNA pseudouridine synthase (RsuA) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004814 | arginine-tRNA ligase activity | IEP | HCCA |
CC | GO:0005778 | peroxisomal membrane | IEP | HCCA |
BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
BP | GO:0006012 | galactose metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0008108 | UDP-glucose:hexose-1-phosphate uridylyltransferase activity | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
BP | GO:0016559 | peroxisome fission | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031903 | microbody membrane | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
CC | GO:0042579 | microbody | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0048285 | organelle fission | IEP | HCCA |
MF | GO:0070569 | uridylyltransferase activity | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
No external refs found! |