Pir_g19972


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19972

Target Alias Description ECC score Gene Family Method Actions
Adi_g021159 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g23916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31186 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02588 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67071.t1 Aspi01Gene67071 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70663.t2 OTP84, Aspi01Gene70663 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012416 No alias not classified & original description: CDS=1-1722 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046573 No alias not classified & original description: CDS=1-1419 0.02 OrthoFinder output from all 47 species
Azfi_s0256.g060514 No alias RecA-activity modulator *(RecX) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.02 OrthoFinder output from all 47 species
Azfi_s2932.g113765 CRR22 not classified & original description: CDS=1-1710 0.04 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g49960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G059500.1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g04509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20199 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24057 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27204 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64055 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008337 No alias not classified & original description: CDS=1-3675 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019430 No alias not classified & original description: CDS=1-4416 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s3367.g028731 No alias not classified & original description: CDS=2473-3459 0.03 OrthoFinder output from all 47 species
Sam_g30124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo98551 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
Spa_g15737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05998 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17885 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26639 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45431 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 276 297
IPR002885 Pentatricopeptide_repeat 174 199
IPR002885 Pentatricopeptide_repeat 50 75
IPR002885 Pentatricopeptide_repeat 77 125
IPR002885 Pentatricopeptide_repeat 200 246
IPR046848 E_motif 319 360
No external refs found!