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  5. Pir_g19770

Pir_g19770 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19770

Target Alias Description ECC score Gene Family Method Actions
Adi_g058770 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37130 No alias methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.21G081800.1 ATMBD6, MBD6,... methylation reader *(MBD5-6) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.26G030700.1 ATMBD6, MBD6,... not classified & original description: pacid=50599956... 0.04 OrthoFinder output from all 47 species
Dcu_g18783 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04554 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g13260.1 MBD05, MBD5, ATMBD5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06313 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01254 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28701 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002716 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=802-2949 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002943 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=1-1323 0.06 OrthoFinder output from all 47 species
Sam_g19246 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 406 456
No external refs found!