- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g005601 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g008293 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g010668 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012988 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036821 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g079794 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g097815 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099249 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g44730 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g03203 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04459 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06767 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07456 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14757 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18507 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26129 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26386 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30558 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g47378 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54371 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54869 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g57160 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g61080 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g03164 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16821 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28421 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g28706 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000731 | No alias | not classified & original description: CDS=1-3192 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007695 | No alias | not classified & original description: CDS=1-2262 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011649 | No alias | not classified & original description: CDS=1-3195 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0010.g012416 | No alias | not classified & original description: CDS=1-1722 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0021.g015711 | No alias | not classified & original description: CDS=1-3111 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016118 | OTP84 | not classified & original description: CDS=1-2007 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0033.g025102 | No alias | not classified & original description: CDS=1-3510 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g029802 | No alias | not classified & original description: CDS=1-2208 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0047.g030252 | No alias | not classified & original description: CDS=1-2775 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0048.g030525 | No alias | not classified & original description: CDS=1-2520 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0059.g034605 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=21-2777 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0072.g036890 | No alias | not classified & original description: CDS=1-1833 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0076.g037861 | No alias | not classified & original description: CDS=1-1125 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0095.g043642 | No alias | not classified & original description: CDS=144-2255 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0102.g044571 | No alias | not classified & original description: CDS=1-2829 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0303.g063761 | No alias | not classified & original description: CDS=81-2876 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0326.g065222 | No alias | not classified & original description: CDS=1-2895 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0380.g067373 | No alias | not classified & original description: CDS=1-3669 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0405.g068373 | No alias | not classified & original description: CDS=1-2967 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0471.g072918 | No alias | not classified & original description: CDS=1-3447 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03349 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05299 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06922 | MEF19 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12399 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16282 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20853 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34770 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g66834 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g77187 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G025700.1 | Ceric.12G025700 | not classified & original description: pacid=50601618... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G018400.1 | Ceric.28G018400 | not classified & original description: pacid=50571000... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G017900.1 | Ceric.29G017900 | not classified & original description: pacid=50624370... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G007900.1 | Ceric.30G007900 | not classified & original description: pacid=50608292... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35240 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03759 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05681 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07695 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08553 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g47766 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15613 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g20812 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_33726 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03910 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04829 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g33493 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g02262 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05012 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05666 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07681 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g13946 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g23637 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g24046 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g33055 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g33290 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g36336 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g40764 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_175623g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_6329g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8893194g0010 | MEF1 | RNA editing factor (MEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03182 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g17295 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28331 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34536 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g40957 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g04945 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06768 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15041 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g21989 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g29103 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g32070 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g38399 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g34957 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63828 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04611 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g29380 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0043.g012842 | CRR2 | not classified & original description: CDS=114-1901 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g02929 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06304 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26655 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27517 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27765 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g34625 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38969 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo76175 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g114660.1.1 | Solyc03g114660 | Pentatricopeptide repeat-containing protein At1g18485... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g15480 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g21818 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g22574 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50886 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g53145 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06419 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17885 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26623 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g26742 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26899 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29098 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29524 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30438 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31404 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31801 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g31905 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g31914 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005246_P001 | Zm00001e005246 | Pentatricopeptide repeat-containing protein At2g41080... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015695_P001 | Zm00001e015695 | Pentatricopeptide repeat-containing protein At4g16835,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 354 | 376 |
| IPR002885 | Pentatricopeptide_repeat | 483 | 513 |
| IPR002885 | Pentatricopeptide_repeat | 83 | 113 |
| IPR002885 | Pentatricopeptide_repeat | 179 | 224 |
| IPR002885 | Pentatricopeptide_repeat | 278 | 325 |
| IPR002885 | Pentatricopeptide_repeat | 582 | 619 |
| IPR002885 | Pentatricopeptide_repeat | 379 | 426 |
| No external refs found! |