Pir_g19514 (GTE4)


Aliases : GTE4

Description : transcriptional co-activator *(BET/GTE) & original description: none


Gene families : OG0000177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000177_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19514

Target Alias Description ECC score Gene Family Method Actions
AT1G06230 GTE4 global transcription factor group E4 0.03 OrthoFinder output from all 47 species
Adi_g050232 BET9, ATBET9 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Adi_g076959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114774 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Aev_g06161 GTE8 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Aev_g18513 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Aob_g09032 BET9, ATBET9 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Cba_g05911 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Cba_g12426 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Cba_g33670 GTE8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36354 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G095200.1 GTE3, Ceric.14G095200 transcriptional co-activator *(BET/GTE) & original... 0.05 OrthoFinder output from all 47 species
Ceric.28G020800.1 GTE4, Ceric.28G020800 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Dac_g03330 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g08190 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g14312 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02601 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01020670001 GTE4 Transcription factor GTE4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01038522001 GTE7 Transcription factor GTE7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_30202 GTE8 transcriptional co-activator (BET/GTE) 0.04 OrthoFinder output from all 47 species
LOC_Os01g11580.1 GTE4, LOC_Os01g11580 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
LOC_Os04g53170.1 GTE7, LOC_Os04g53170 transcriptional co-activator (BET/GTE) 0.01 OrthoFinder output from all 47 species
Len_g17766 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
MA_18020g0010 GTE4 transcriptional co-activator (BET/GTE) 0.04 OrthoFinder output from all 47 species
Mp2g14370.1 GTE4 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Nbi_g01174 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g02143 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g12675 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Ore_g29656 GTE8 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Ore_g30636 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g10793 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g20991 GTE8 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Sam_g20005 No alias transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Sam_g28433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49069 No alias transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Smo28941 No alias Transcription factor GTE10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc02g091660.3.1 GTE7, Solyc02g091660 transcriptional co-activator (BET/GTE) 0.01 OrthoFinder output from all 47 species
Solyc07g062660.4.1 GTE4, Solyc07g062660 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Spa_g46716 BET9, ATBET9 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Tin_g03373 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e016462_P001 GTE4, Zm00001e016462 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Zm00001e024861_P001 GTE4, Zm00001e024861 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Zm00001e026041_P001 GTE4, Zm00001e026041 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Zm00001e029260_P001 BET9, ATBET9,... transcriptional co-activator (BET/GTE) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 203 287
IPR027353 NET_dom 364 422
No external refs found!