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  5. Pir_g19369

Pir_g19369 (emb1138)


Aliases : emb1138

Description : group-II intron splicing RNA helicase *(RH3) & original description: none


Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19369
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Adi_g023797 PMH1, ATRH9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14243 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18513 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0173.g055880 PRH75 not classified & original description: CDS=321-2342 0.03 OrthoFinder output from all 47 species
Msp_g01214 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g006320.3.1 PMH2, ATRH53,... RNA helicase (PMH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR012562 GUCT 523 620
IPR011545 DEAD/DEAH_box_helicase_dom 119 291
IPR001878 Znf_CCHC 726 741
IPR001650 Helicase_C 332 436
No external refs found!