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  5. Pir_g19111

Pir_g19111


Description : not classified & original description: none


Gene families : OG0004787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00166420 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
Ala_g07642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022255001 No alias No description available 0.06 OrthoFinder output from all 47 species
Lfl_g02480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_693456g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp4g01220.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g29875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006162_P003 Zm00001e006162 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR028107 Spatacsin_C_dom 2807 3097
No external refs found!