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  5. Pir_g19075

Pir_g19075 (CPL4)


Aliases : CPL4

Description : subcluster H/CPL3-4 phosphatase & original description: none


Gene families : OG0001184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19075

Target Alias Description ECC score Gene Family Method Actions
AT2G33540 ATCPL3, CPL3 C-terminal domain phosphatase-like 3 0.03 OrthoFinder output from all 47 species
Adi_g045430 ATCPL3, CPL3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05116 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31997 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20448 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435719g0010 CPL4 RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012390 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description:... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 156 317
IPR001357 BRCT_dom 403 463
No external refs found!