AT5G17800 (MYB56, AtMYB56)


Aliases : MYB56, AtMYB56

Description : myb domain protein 56


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000116 (LandPlants) Phylogenetic Tree(s): OG_02_0000116_tree ,
OG_03_0000572 (SeedPlants) Phylogenetic Tree(s): OG_03_0000572_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G17800
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00007p00169630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00024p00224470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00221670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00096p00076220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00105p00029600 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 Archaeplastida
AT1G66230 AtMYB20, MYB20 myb domain protein 20 0.03 Archaeplastida
AT3G12820 MYB10, AtMYB10 myb domain protein 10 0.03 Archaeplastida
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.03 Archaeplastida
AT4G13480 AtMYB79, MYB79 myb domain protein 79 0.04 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.02 Archaeplastida
GSVIVT01008005001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012778001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01015575001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036802001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_09998 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_19348 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_33428 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_34882 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g09480.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g36890.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g54520.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g44090.3 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g33940.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10217366g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10431212g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_246142g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_246817g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_33964g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_437179g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_7091g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_80033g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp1g09420.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c14_12390V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c15_7790V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.04 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.03 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Solyc01g079620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g092930.1.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g093890.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g052850.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g011780.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.04 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004128_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004568_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e013910_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016791_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020754_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e026250_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028653_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030961_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034072_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035233_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e041535_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 LandPlants
AMTR_s00007p00169630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.04 LandPlants
AT3G50060 MYB77 myb domain protein 77 0.03 LandPlants
Gb_24073 No alias transcription factor (MYB) 0.02 LandPlants
Gb_35820 No alias transcription factor (MYB) 0.03 LandPlants
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.03 LandPlants
LOC_Os02g09480.1 No alias transcription factor (MYB) 0.02 LandPlants
MA_89683g0010 No alias transcription factor (MYB) 0.02 LandPlants
Pp3c1_1650V3.1 No alias myb domain protein 105 0.02 LandPlants
Pp3c2_34670V3.1 No alias myb domain protein 105 0.02 LandPlants
Pp3c6_24650V3.1 No alias myb domain protein 109 0.01 LandPlants
Solyc02g092930.1.1 No alias transcription factor (MYB) 0.07 LandPlants
Solyc04g079360.1.1 No alias transcription factor (MYB) 0.03 LandPlants
Solyc05g052850.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc09g011780.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e004128_P003 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e005507_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e013910_P001 No alias transcription factor (MYB) 0.04 LandPlants
Zm00001e030480_P001 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e037510_P001 No alias transcription factor (MYB) 0.02 LandPlants
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
LOC_Os08g33800.1 No alias transcription factor (MYB) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 93 138
IPR001005 SANT/Myb 145 188
No external refs found!