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  5. AMTR_s00013p00209880

AMTR_s00013p00209880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.145

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL18 component


Gene families : OG_01_0002601 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002601_tree ,
OG_02_0005445 (LandPlants) Phylogenetic Tree(s): OG_02_0005445_tree ,
OG_03_0007992 (SeedPlants) Phylogenetic Tree(s): OG_03_0007992_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00209880
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G48350 No alias Ribosomal L18p/L5e family protein 0.05 Archaeplastida
Cre01.g052100 No alias Protein biosynthesis.organelle translation... 0.06 Archaeplastida
GSVIVT01017720001 No alias Protein biosynthesis.organelle translation... 0.03 Archaeplastida
Gb_12756 No alias component psRPL18 of large ribosomal subunit proteome 0.08 Archaeplastida
LOC_Os03g61260.1 No alias component psRPL18 of large ribosomal subunit proteome 0.06 Archaeplastida
MA_7609850g0010 No alias 50S ribosomal protein L18, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida
Mp6g08500.1 No alias component psRPL18 of large ribosomal subunit proteome 0.11 Archaeplastida
Pp3c11_5070V3.1 No alias Ribosomal L18p/L5e family protein 0.1 Archaeplastida
Pp3c7_24650V3.1 No alias Ribosomal L18p/L5e family protein 0.09 Archaeplastida
Smo143891 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Solyc12g098890.2.1 No alias component psRPL18 of large ribosomal subunit proteome 0.09 Archaeplastida
Zm00001e006246_P001 No alias component psRPL18 of large ribosomal subunit proteome 0.1 Archaeplastida
AT1G48350 No alias Ribosomal L18p/L5e family protein 0.05 LandPlants
Gb_12756 No alias component psRPL18 of large ribosomal subunit proteome 0.07 LandPlants
LOC_Os03g61260.1 No alias component psRPL18 of large ribosomal subunit proteome 0.06 LandPlants
MA_7609850g0010 No alias 50S ribosomal protein L18, chloroplastic OS=Arabidopsis... 0.04 LandPlants
Mp6g08500.1 No alias component psRPL18 of large ribosomal subunit proteome 0.09 LandPlants
Pp3c11_5070V3.1 No alias Ribosomal L18p/L5e family protein 0.09 LandPlants
Pp3c7_24650V3.1 No alias Ribosomal L18p/L5e family protein 0.08 LandPlants
Smo143891 No alias Protein biosynthesis.organelle translation... 0.04 LandPlants
Solyc12g098890.2.1 No alias component psRPL18 of large ribosomal subunit proteome 0.09 LandPlants
Zm00001e006246_P001 No alias component psRPL18 of large ribosomal subunit proteome 0.09 LandPlants
AT1G48350 No alias Ribosomal L18p/L5e family protein 0.05 SeedPlants
GSVIVT01017720001 No alias Protein biosynthesis.organelle translation... 0.02 SeedPlants
Gb_12756 No alias component psRPL18 of large ribosomal subunit proteome 0.07 SeedPlants
LOC_Os03g61260.1 No alias component psRPL18 of large ribosomal subunit proteome 0.06 SeedPlants
MA_7609850g0010 No alias 50S ribosomal protein L18, chloroplastic OS=Arabidopsis... 0.04 SeedPlants
Solyc12g098890.2.1 No alias component psRPL18 of large ribosomal subunit proteome 0.09 SeedPlants
Zm00001e006246_P001 No alias component psRPL18 of large ribosomal subunit proteome 0.09 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 47 164
No external refs found!