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  5. Pir_g18807

Pir_g18807 (CDC23, APC8)


Aliases : CDC23, APC8

Description : component *(APC8) of (APC/C)-dependent ubiquitination arc lamp subcomplex & original description: none


Gene families : OG0005671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005671_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18807

Target Alias Description ECC score Gene Family Method Actions
Ala_g16427 CDC23, APC8 component *(APC8) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Aob_g15543 CDC23, APC8 component *(APC8) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70021.t1 CDC23, APC8,... component *(APC8) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024796 CDC23, APC8 component *(APC8) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Nbi_g03710 CDC23, APC8 component *(APC8) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Solyc03g113740.4.1 CDC23, APC8,... component APC8 of (APC/C)-dependent ubiquitination arc... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR007192 APC8 9 153
IPR019734 TPR_repeat 335 366
No external refs found!