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  5. Pir_g18630

Pir_g18630


Description : U-Box-group-II E3 ubiquitin ligase & original description: none


Gene families : OG0004266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18630

Target Alias Description ECC score Gene Family Method Actions
Ceric.02G044300.1 ATPUB45, PUB45,... U-Box-group-II E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G047200.1 PUB39, Ceric.29G047200 U-Box-group-II E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
LOC_Os06g13080.1 PUB39, LOC_Os06g13080 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Sam_g07889 No alias U-Box-group-II E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 18 87
IPR000225 Armadillo 390 427
No external refs found!