1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g18575

Pir_g18575


Description : not classified & original description: none


Gene families : OG0002505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002505_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18575
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00023240 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G03880 No alias Thioredoxin family protein 0.04 OrthoFinder output from all 47 species
Als_g13665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021616.13 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g02104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00928 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033851001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01036436001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os08g44400.1 LOC_Os08g44400 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g19609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g009820.4.1 Solyc09g009820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g04178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008030_P003 Zm00001e008030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR004045 Glutathione_S-Trfase_N 250 318
IPR004045 Glutathione_S-Trfase_N 129 205
No external refs found!