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  5. Pir_g18407

Pir_g18407 (CA1, ATBCA1, SABP3, ATSABP3)


Aliases : CA1, ATBCA1, SABP3, ATSABP3

Description : beta-type carbonic anhydrase & original description: none


Gene families : OG0000485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18407
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Aev_g09362 BCA4, CA4, ATBCA4 beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g01673 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00637 BCA4, CA4, ATBCA4 beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01426 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05577 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G018400.1 BCA4, CA4,... beta-type carbonic anhydrase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15579 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07630 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007742001 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
GSVIVT01032466001 CA1, ATBCA1,... Beta carbonic anhydrase 1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g45274.1 CA18, CA2, BETA... Carbonic anhydrase, chloroplastic OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
Lfl_g04517 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
MA_25325g0010 CA1, ATBCA1,... Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Mp3g08980.1 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Pisum sativum... 0.02 OrthoFinder output from all 47 species
Nbi_g09121 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08176 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17950 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12589 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c1_19190V3.1 CA18, CA2, BETA... carbonic anhydrase 2 0.02 OrthoFinder output from all 47 species
Sam_g10150 No alias beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Smo95906 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Tin_g15516 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020360_P004 BCA4, CA4,... Carbonic anhydrase, chloroplastic OS=Hordeum vulgare... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
CC GO:0009521 photosystem IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
InterPro domains Description Start Stop
IPR001765 Carbonic_anhydrase 93 253
No external refs found!