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  5. Pir_g18291

Pir_g18291


Description : regulatory protein *(CORD) of cortical microtubule organisation & original description: none


Gene families : OG0001085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18291

Target Alias Description ECC score Gene Family Method Actions
Aev_g13375 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Aop_g21291 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Cba_g10532 No alias regulatory protein *(CORD) of cortical microtubule... 0.02 OrthoFinder output from all 47 species
Ehy_g02885 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Len_g47041 No alias regulatory protein *(CORD) of cortical microtubule... 0.02 OrthoFinder output from all 47 species
Msp_g02489 No alias regulatory protein *(CORD) of cortical microtubule... 0.02 OrthoFinder output from all 47 species
Msp_g15024 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002947 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032104 regulation of response to extracellular stimulus IEP HCCA
BP GO:0032107 regulation of response to nutrient levels IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097602 cullin family protein binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR010341 DUF936_pln 4 923
No external refs found!