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  5. Pir_g18208

Pir_g18208 (AFH14)


Aliases : AFH14

Description : group-II formin actin filament elongation factor & original description: none


Gene families : OG0000743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18208

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020961.51 No alias Formin-like protein 18 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01003875001 No alias Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
LOC_Os02g55150.1 LOC_Os02g55150 group-II formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g17130.1 LOC_Os04g17130 group-II formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Ppi_g33167 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Sam_g18629 No alias group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Solyc06g069660.2.1 Solyc06g069660 Formin-like protein 20 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e003000_P001 Zm00001e003000 group-II formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Zm00001e018139_P003 Zm00001e018139 group-II formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Zm00001e022144_P001 Zm00001e022144 group-II formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0030328 prenylcysteine catabolic process IEP HCCA
BP GO:0030329 prenylcysteine metabolic process IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR014020 Tensin_C2-dom 199 337
IPR015425 FH2_Formin 718 1091
No external refs found!