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  5. Pir_g18042

Pir_g18042 (GMD1)


Aliases : GMD1

Description : EC_4.2 carbon-oxygen lyase & original description: none


Gene families : OG0001979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001979_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18042

Target Alias Description ECC score Gene Family Method Actions
AT3G51160 GMD2, MUR1, MUR_1 NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g16780 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16156 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05274 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g084210.1.1 GMD1, Solyc02g084210 GDP-D-mannose 4,6-dehydratase (MUR1) 0.03 OrthoFinder output from all 47 species
Solyc03g118270.1.1 GMD1, Solyc03g118270 GDP-D-mannose 4,6-dehydratase (MUR1) 0.02 OrthoFinder output from all 47 species
Tin_g15131 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029952_P001 GMD2, MUR1,... GDP-D-mannose 4,6-dehydratase (MUR1) 0.03 OrthoFinder output from all 47 species
Zm00001e036558_P001 GMD2, MUR1,... GDP-D-mannose 4,6-dehydratase (MUR1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 10 324
No external refs found!