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  5. AT5G16880

AT5G16880


Description : Target of Myb protein 1


Gene families : OG_01_0000369 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000369_tree ,
OG_02_0003400 (LandPlants) Phylogenetic Tree(s): OG_02_0003400_tree ,
OG_03_0004543 (SeedPlants) Phylogenetic Tree(s): OG_03_0004543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G16880
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00118270 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.03 Archaeplastida
AMTR_s00067p00032430 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.02 Archaeplastida
Cre13.g585100 No alias No description available 0.01 Archaeplastida
GSVIVT01014122001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 Archaeplastida
GSVIVT01028344001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 Archaeplastida
GSVIVT01030233001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 Archaeplastida
Gb_13955 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
LOC_Os02g46962.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
LOC_Os05g39760.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
LOC_Os06g22650.1 No alias TOM endomembrane trafficking associated protein 0.07 Archaeplastida
LOC_Os11g09329.1 No alias TOM endomembrane trafficking associated protein 0.05 Archaeplastida
MA_10303853g0010 No alias TOM1-like protein 9 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10426607g0010 No alias Hexokinase-2 OS=Solanum tuberosum (sp|q9sq76|hxk2_soltu : 105.0) 0.05 Archaeplastida
MA_10433759g0010 No alias TOM1-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c20_7060V3.1 No alias ENTH/VHS/GAT family protein 0.02 Archaeplastida
Pp3c23_19630V3.1 No alias ENTH/VHS/GAT family protein 0.03 Archaeplastida
Smo176673 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 Archaeplastida
Solyc03g097070.3.1 No alias TOM endomembrane trafficking associated protein 0.04 Archaeplastida
Solyc04g063280.3.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Solyc08g068370.3.1 No alias TOM endomembrane trafficking associated protein 0.04 Archaeplastida
Solyc10g044750.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
AMTR_s00048p00118270 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.03 LandPlants
GSVIVT01014122001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 LandPlants
LOC_Os02g46962.1 No alias TOM endomembrane trafficking associated protein 0.03 LandPlants
Solyc03g097070.3.1 No alias TOM endomembrane trafficking associated protein 0.03 LandPlants
AMTR_s00048p00118270 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.03 SeedPlants
GSVIVT01014122001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 SeedPlants
LOC_Os02g46962.1 No alias TOM endomembrane trafficking associated protein 0.02 SeedPlants
Solyc03g097070.3.1 No alias TOM endomembrane trafficking associated protein 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005795 Golgi stack ISS Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006623 protein targeting to vacuole RCA Interproscan
BP GO:0006886 intracellular protein transport ISS Interproscan
BP GO:0006891 intra-Golgi vesicle-mediated transport ISS Interproscan
MF GO:0008565 obsolete protein transporter activity ISS Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002014 VHS_dom 47 179
IPR004152 GAT_dom 241 313
No external refs found!