AT5G16750 (TOZ)


Aliases : TOZ

Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0003962 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003962_tree ,
OG_02_0005807 (LandPlants) Phylogenetic Tree(s): OG_02_0005807_tree ,
OG_03_0006787 (SeedPlants) Phylogenetic Tree(s): OG_03_0006787_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G16750
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
Cpa|evm.model.tig00000704.60 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00000704.61 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
Cpa|evm.model.tig00000704.62 No alias No description available 0.01 Archaeplastida
Cre07.g344050 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 Archaeplastida
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 Archaeplastida
Gb_13772 No alias SSU processome assembly factor (TOZ) 0.1 Archaeplastida
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.2 Archaeplastida
MA_10426255g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10601g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10601g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_566936g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp8g08070.1 No alias SSU processome assembly factor (TOZ) 0.11 Archaeplastida
Pp3c19_12460V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.23 Archaeplastida
Smo80645 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.23 Archaeplastida
Zm00001e007090_P001 No alias SSU processome assembly factor (TOZ) 0.1 Archaeplastida
Zm00001e041546_P002 No alias SSU processome assembly factor (TOZ) 0.18 Archaeplastida
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 LandPlants
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 LandPlants
Gb_13772 No alias SSU processome assembly factor (TOZ) 0.1 LandPlants
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.19 LandPlants
MA_10426255g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_566936g0010 No alias no hits & (original description: none) 0.05 LandPlants
Mp8g08070.1 No alias SSU processome assembly factor (TOZ) 0.11 LandPlants
Pp3c19_12460V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.23 LandPlants
Smo80645 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 LandPlants
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.22 LandPlants
Zm00001e007090_P001 No alias SSU processome assembly factor (TOZ) 0.09 LandPlants
Zm00001e041546_P002 No alias SSU processome assembly factor (TOZ) 0.18 LandPlants
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 SeedPlants
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 SeedPlants
Gb_13772 No alias SSU processome assembly factor (TOZ) 0.09 SeedPlants
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.18 SeedPlants
MA_10426255g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_566936g0010 No alias no hits & (original description: none) 0.05 SeedPlants
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.22 SeedPlants
Zm00001e007090_P001 No alias SSU processome assembly factor (TOZ) 0.09 SeedPlants
Zm00001e041546_P002 No alias SSU processome assembly factor (TOZ) 0.18 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
BP GO:0001510 RNA methylation RCA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005730 nucleolus IDA Interproscan
BP GO:0006406 mRNA export from nucleus RCA Interproscan
BP GO:0006606 protein import into nucleus RCA Interproscan
BP GO:0007062 sister chromatid cohesion RCA Interproscan
BP GO:0009640 photomorphogenesis RCA Interproscan
BP GO:0009793 embryo development ending in seed dormancy IMP Interproscan
BP GO:0009793 embryo development ending in seed dormancy RCA Interproscan
BP GO:0009845 seed germination RCA Interproscan
BP GO:0009880 embryonic pattern specification IMP Interproscan
BP GO:0009880 embryonic pattern specification RCA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0009933 meristem structural organization RCA Interproscan
BP GO:0010072 primary shoot apical meristem specification RCA Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
BP GO:0010182 sugar mediated signaling pathway RCA Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
BP GO:0010431 seed maturation RCA Interproscan
BP GO:0010564 regulation of cell cycle process RCA Interproscan
BP GO:0016567 protein ubiquitination RCA Interproscan
BP GO:0019915 lipid storage RCA Interproscan
BP GO:0045595 regulation of cell differentiation RCA Interproscan
BP GO:0048366 leaf development RCA Interproscan
BP GO:0048825 cotyledon development RCA Interproscan
BP GO:0050826 response to freezing RCA Interproscan
BP GO:0051301 cell division IMP Interproscan
BP GO:0051301 cell division RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013934 SSU_processome_Utp13 675 808
IPR001680 WD40_repeat 183 220
IPR001680 WD40_repeat 616 652
IPR001680 WD40_repeat 573 611
IPR001680 WD40_repeat 495 526
IPR001680 WD40_repeat 437 475
IPR001680 WD40_repeat 534 568
IPR001680 WD40_repeat 136 174
IPR001680 WD40_repeat 392 432
IPR001680 WD40_repeat 93 130
IPR001680 WD40_repeat 56 88
No external refs found!