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  5. Pir_g17692

Pir_g17692 (At-RS41, RS41, ATRSP41)


Aliases : At-RS41, RS41, ATRSP41

Description : RNA splicing factor *(RS31/40/41) & original description: none


Gene families : OG0002134 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g17692

Target Alias Description ECC score Gene Family Method Actions
Aop_g58168 At-RS41, RS41, ATRSP41 RNA splicing factor *(RS31/40/41) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g77235 At-RS41, RS41, ATRSP41 RNA splicing factor *(RS31/40/41) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09104 At-RS31, RS31,... RNA splicing factor *(RS31/40/41) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08956 At-RS41, RS41, ATRSP41 RNA splicing factor *(RS31/40/41) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027193001 At-RS31, RS31,... RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Pnu_g07121 At-RS41, RS41, ATRSP41 RNA splicing factor *(RS31/40/41) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04323 At-RS41, RS41, ATRSP41 RNA splicing factor *(RS31/40/41) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 97 159
IPR000504 RRM_dom 4 62
No external refs found!