AMTR_s00001p00271900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.500

Description : Multi-process regulation.circadian clock.morning element regulation.LWD activation factor


Gene families : OG_01_0001679 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001679_tree ,
OG_02_0001586 (LandPlants) Phylogenetic Tree(s): OG_02_0001586_tree ,
OG_03_0001588 (SeedPlants) Phylogenetic Tree(s): OG_03_0001588_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00271900
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g32430.1 No alias WD repeat-containing protein LWD1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os02g45810.1 No alias Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os02g32430.1 No alias WD repeat-containing protein LWD1 OS=Arabidopsis... 0.03 LandPlants
LOC_Os02g45810.1 No alias Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... 0.02 LandPlants
MA_637135g0010 No alias LWD circadian clock activation factor 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 163 196
IPR001680 WD40_repeat 250 287
No external refs found!