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  5. Pir_g17246

Pir_g17246


Description : not classified & original description: none


Gene families : OG0002130 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002130_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g17246

Target Alias Description ECC score Gene Family Method Actions
Adi_g024500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G086500.1 Ceric.11G086500 not classified & original description: pacid=50595042... 0.03 OrthoFinder output from all 47 species
Ceric.13G094100.1 Ceric.13G094100 not classified & original description: pacid=50636510... 0.05 OrthoFinder output from all 47 species
Ceric.28G009300.1 Ceric.28G009300 not classified & original description: pacid=50570004... 0.04 OrthoFinder output from all 47 species
Cre08.g364700 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g03230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01016123001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os08g15080.1 LOC_Os08g15080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10684g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g02029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 208 269
No external refs found!