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  5. Pir_g16686

Pir_g16686


Description : not classified & original description: none


Gene families : OG0001257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16686

Target Alias Description ECC score Gene Family Method Actions
Adi_g080822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000024 No alias not classified & original description: CDS=135-1508 0.03 OrthoFinder output from all 47 species
LOC_Os05g34070.1 LOC_Os05g34070 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g09908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g078300.2.1 Solyc10g078300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g55799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009475_P001 Zm00001e009475 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR024771 SUZ 146 196
IPR001374 R3H_dom 55 103
No external refs found!