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  5. Pir_g16543

Pir_g16543 (EMB1444)


Aliases : EMB1444

Description : LHW/LHL-type transcription factor & original description: none


Gene families : OG0001070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16543
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene08038.t1 LHW, Aspi01Gene08038 LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54195.t2 LHW, Aspi01Gene54195 LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G004600.1 Ceric.19G004600 LHW/LHL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Gb_28489 LHW transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Mp7g02370.1 LHW Transcription factor LHW OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Ppi_g46344 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24842 No alias LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27236 No alias LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g074110.3.1 LHW, Solyc06g074110 Transcription factor LHW OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g066280.4.1 EMB1444, Solyc09g066280 Transcription factor EMB1444 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g18097 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009089_P003 LHW, Zm00001e009089 Transcription factor LHW OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e024625_P002 LHW, Zm00001e024625 Transcription factor LHW OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e039416_P001 LHW, Zm00001e039416 Transcription factor LHW OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 6 148
No external refs found!