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  5. Pir_g16421

Pir_g16421 (AtMYB20, MYB20)


Aliases : AtMYB20, MYB20

Description : MYB class-R2R3 transcription factor & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16421
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00252530 AtMYB83, MYB83,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00037p00177500 ATMYB101,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00139p00079430 ATMYB4, MYB4,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.05 OrthoFinder output from all 47 species
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.04 OrthoFinder output from all 47 species
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.02 OrthoFinder output from all 47 species
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.02 OrthoFinder output from all 47 species
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.03 OrthoFinder output from all 47 species
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.05 OrthoFinder output from all 47 species
AT4G37780 ATMYB87, MYB87 myb domain protein 87 0.01 OrthoFinder output from all 47 species
AT4G38620 ATMYB4, MYB4 myb domain protein 4 0.01 OrthoFinder output from all 47 species
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.02 OrthoFinder output from all 47 species
AT5G12870 ATMYB46, MYB46 myb domain protein 46 0.03 OrthoFinder output from all 47 species
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.03 OrthoFinder output from all 47 species
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.03 OrthoFinder output from all 47 species
Adi_g008979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04664 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22400 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Als_g12453 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Als_g32240 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
Als_g40583 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19913 MYB86, ATMYB86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04469 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08188.t1 ATMYB61, MYB61,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35100.t1 MYB103,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene61793.t1 AtMYB85, MYB85,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71679.t1 MYB6, AtMYB6,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g008082 MYB103,... not classified & original description: CDS=1-2001 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011612 ATMYB61, MYB61 not classified & original description: CDS=52-1407 0.01 OrthoFinder output from all 47 species
Azfi_s0129.g048859 AtMYB107, MYB107 not classified & original description: CDS=183-1736 0.03 OrthoFinder output from all 47 species
Ceric.05G075100.1 AtMYB20, MYB20,... MYB class-R2R3 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.25G002200.1 AtMYB50, MYB50,... not classified & original description: pacid=50593537... 0.03 OrthoFinder output from all 47 species
Ceric.35G046400.1 ATMYB61, MYB61,... MYB class-R2R3 subgroup-13 transcription factor &... 0.04 OrthoFinder output from all 47 species
Dac_g14180 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dac_g38014 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14426 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dcu_g20440 MYB86, ATMYB86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00659 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g04249 MYB7, ATY49, ATMYB7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004317001 AtMYB42, MYB42 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01007670001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01011417001 MYB30, ATMYB30 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01017716001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01018577001 AtMYB42, MYB42 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01025269001 AtMYB83, MYB83 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01028171001 BOS1, AtMYB108, MYB108 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01028235001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01030434001 ATMYB101, MYB101, ATM1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01032088001 AtMYB83, MYB83 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01032467001 MYB66, ATMYB66, WER, WER1 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
GSVIVT01036802001 MYB58, ATMYB58 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Gb_03994 ATY53, ATMYB67, MYB67 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g07450.1 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g18240.1 ATMYB61, MYB61,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g42870.1 AtMYB17, MYB17,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g46780.1 MYB58, ATMYB58,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g50770.1 MYB58, ATMYB58,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g04820.1 ATMYB61, MYB61,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os05g46610.1 MYB86, ATMYB86,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os07g37210.1 MYB41, AtMYB41,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os07g43580.1 MYB30, ATMYB30,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os07g44090.3 AtMYB50, MYB50,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os08g05520.1 MYB103,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g36730.1 ATMYB4, MYB4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os11g03440.1 MYB60, AtMYB60,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os12g37970.1 ATMYB48-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Len_g45631 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58682 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Lfl_g06052 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Lfl_g13620 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Lfl_g18459 MYB19, AtMYB19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10048467g0010 ATMYB5, MYB5 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_199974g0010 ATMYB4, MYB4 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_446064g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_82197g0010 MYB30, ATMYB30 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_95226g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp3g23170.1 MYB103,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Msp_g07844 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Msp_g12152 ATMYB61, MYB61 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21179 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.04 OrthoFinder output from all 47 species
Msp_g38891 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21247 MYB43, AtMYB43 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32592 ATMYB46, MYB46 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29597 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ppi_g63855 ATMYB46, MYB46 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012546 ATMYB101, MYB101, ATM1 MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014109 ATMIXTA, MYB16, ATMYB16 not classified & original description: CDS=359-1453 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017015 AtMYB20, MYB20 not classified & original description: CDS=287-2173 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018401 AtMYB107, MYB107 not classified & original description: CDS=146-2035 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022448 MYB86, ATMYB86 not classified & original description: CDS=703-2688 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0255.g026820 ATMYB46, MYB46 not classified & original description: CDS=1-1707 0.02 OrthoFinder output from all 47 species
Sam_g02474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo84608 MYB86, ATMYB86 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc01g009650.1.1 MYB19, AtMYB19,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Solyc01g057910.3.1 AtMYB78, MYB78,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc01g087130.4.1 AtMYB83, MYB83,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Solyc02g082040.3.1 ATY53, ATMYB67,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc03g112390.3.1 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc05g053150.2.1 MYB305, ATMYB71,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc07g006750.3.1 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc08g079270.3.1 AtMYB42, MYB42,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc08g081500.3.1 MYB103,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Solyc10g005240.3.1 ATY53, ATMYB67,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc10g005460.3.1 ATMYB102, ATM4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc12g099140.2.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Spa_g09680 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Spa_g18326 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Spa_g21707 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01095 AtMYB17, MYB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18882 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31077 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001399_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e017428_P003 ATMYB61, MYB61,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e020044_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e024682_P001 AtMYB42, MYB42,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e031799_P001 ATMYB4, MYB4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e035652_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e038964_P001 MYB305, ATMYB71,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e040265_P001 MYB103,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e040384_P001 ATMYB61, MYB61,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e041239_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e042415_P001 MYB60, AtMYB60,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 68 110
No external refs found!