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  5. Pir_g16390

Pir_g16390


Description : not classified & original description: none


Gene families : OG0014354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014354_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16390

Target Alias Description ECC score Gene Family Method Actions
Aop_g27629 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g31922 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014342 No alias not classified & original description: CDS=1-1818 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 313 334
IPR002885 Pentatricopeptide_repeat 342 372
IPR002885 Pentatricopeptide_repeat 242 272
IPR002885 Pentatricopeptide_repeat 214 240
IPR002885 Pentatricopeptide_repeat 543 566
IPR002885 Pentatricopeptide_repeat 572 596
IPR002885 Pentatricopeptide_repeat 141 186
IPR002885 Pentatricopeptide_repeat 467 513
No external refs found!