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  5. Pir_g16375

Pir_g16375 (HSL1, VAL2, HSI2-L1)


Aliases : HSL1, VAL2, HSI2-L1

Description : LAV-VAL-type transcription factor & original description: none


Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16375
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Adi_g103348 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07210 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g37610.1 HSI2, VAL1,... transcription factor (LAV-VAL) 0.02 OrthoFinder output from all 47 species
Lfl_g28672 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_119006g0010 HSI2, VAL1 B3 domain-containing protein Os07g0679700 OS=Oryza... 0.02 OrthoFinder output from all 47 species
MA_95218g0010 HSL1, VAL2, HSI2-L1 B3 domain-containing protein Os07g0679700 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Ore_g28522 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06169 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06873 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010979_P001 HSL1, VAL2,... transcription factor (LAV-VAL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 270 370
IPR011124 Znf_CW 543 585
No external refs found!