- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : RVE2, CIR1
Description : transcription factor *(REVEILLE) & original description: none
Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cba_g24529 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G087900.1 | RVE2, CIR1,... | transcription factor *(REVEILLE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G032400.1 | RVE2, CIR1,... | transcription factor *(REVEILLE) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g514400 | RVE2, CIR1 | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g06441 | No alias | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22032 | RVE1 | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09144 | RVE1 | transcription factor *(REVEILLE) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g45670.1 | LOC_Os02g45670 | transcription factor (MYB-related). REVEILLE circadian... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g26311 | RVE2, CIR1 | transcription factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g32617 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Smo166821 | No alias | Multi-process regulation.circadian clock.core oscillator... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040217_P001 | LHY1, LHY, Zm00001e040217 | circadian clock core oscillator protein (LHY|CCA1) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 28 | 71 |
| No external refs found! |