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  5. AT5G15300

AT5G15300


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0012988 (Archaeplastida) Phylogenetic Tree(s): OG_01_0012988_tree ,
OG_02_0012953 (LandPlants) Phylogenetic Tree(s): OG_02_0012953_tree ,
OG_03_0013008 (SeedPlants) Phylogenetic Tree(s): OG_03_0013008_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G15300
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011444001 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.03 Archaeplastida
LOC_Os03g07234.1 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.06 Archaeplastida
Zm00001e038919_P001 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.06 Archaeplastida
GSVIVT01011444001 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.03 LandPlants
LOC_Os03g07234.1 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.11 LandPlants
Zm00001e038919_P001 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.03 LandPlants
GSVIVT01011444001 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.02 SeedPlants
LOC_Os03g07234.1 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.1 SeedPlants
Zm00001e038919_P001 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 75 124
IPR002885 Pentatricopeptide_repeat 238 286
IPR002885 Pentatricopeptide_repeat 317 344
IPR002885 Pentatricopeptide_repeat 419 443
IPR002885 Pentatricopeptide_repeat 381 408
IPR002885 Pentatricopeptide_repeat 179 205
No external refs found!